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OpenClaw-Medical-Skills
The largest open-source medical AI skills library for OpenClawπ¦.
git clone https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills
OpenClaw Medical Skills
The largest open-source medical AI skill library for OpenClaw.
869 curated skills Β· Clinical Β· Genomics Β· Drug Discovery Β· Bioinformatics Β· Medical Devices
What Is This?
OpenClaw Medical Skills is a curated collection of 869 AI agent skills covering the full spectrum of biomedical and clinical research. These skills are designed for OpenClaw / NanoClaw β Claude-based personal AI assistant frameworks β and transform a general-purpose AI agent into a powerful medical and scientific research companion.
Each skill is a self-contained module (a SKILL.md file) that:
- Teaches the agent specialized domain knowledge and workflows
- Connects to real databases, APIs, and computational tools
- Produces structured, clinically or scientifically relevant outputs
We benefit from the open-source community. The full collection of resources can be found here: Awesome LLM Resources
Why This Collection Matters
| Without Skills | With OpenClaw Medical Skills |
|---|---|
| Generic AI responses about medicine | Real PubMed / ClinicalTrials.gov / FDA queries |
| No bioinformatics capability | RNA-seq, scRNA-seq, GWAS, variant calling pipelines |
| No drug intelligence | ChEMBL, DrugBank, DDI prediction, pharmacovigilance |
| No clinical documentation | SOAP notes, discharge summaries, prior auth decisions |
| No genomics support | VCF annotation, ACMG classification, PRS calculation |
| No regulatory guidance | FDA, CE mark, IEC 62304, ISO 14971 compliance |
This collection aggregates skills from 12+ open-source skill repositories spanning academic research tools, clinical workflows, regulatory frameworks, and cutting-edge AI-driven protein design β giving your AI agent capabilities comparable to a team of specialized research scientists.
Installation
Requirements
For OpenClaw Users
OpenClaw loads skills from two locations:
| Priority | Path | Scope |
|---|---|---|
| High | <workspace>/skills/ | Per-workspace (recommended) |
| Low | ~/.openclaw/skills/ | Global, shared across all agents |
Method 1 β Clone and Copy (Recommended)
# Clone this repository (skills only β skips large data files)
git clone --depth=1 --no-checkout https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git
cd OpenClaw-Medical-Skills
git sparse-checkout init --cone
git sparse-checkout set skills
git checkout main
# Install to your workspace skills directory
cp -r skills/* <your-workspace>/skills/
# Or install globally (available to all agents)
cp -r skills/* ~/.openclaw/skills/
Note: Some skills bundle large data files (databases, datasets). The sparse-checkout method above avoids downloading them. If you need the full repo including all data, install Git LFS first, then run
git clone https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git.
Skills are picked up automatically on the next session. No restart needed.
Method 2 β OpenClaw CLI
If you use the OpenClaw plugin registry, you can search and install individual skills from there. For bulk install from this collection, Method 1 is faster.
openclaw plugins install <skill-slug> # install a single skill
openclaw plugins update # update all installed skills
Method 3 β Configure Extra Directories
To point OpenClaw at a cloned copy of this repo permanently, add it to ~/.openclaw/openclaw.json:
{
"plugins": {
"local": ["/path/to/OpenClaw-Medical-Skills"]
}
}
This mounts the entire collection without copying files.
Method 4 β Install Selected Skills Only
Pick skills relevant to your domain:
# Example: clinical + drug discovery stack
SKILLS=(
"clinical-reports"
"tooluniverse-drug-research"
"tooluniverse-pharmacovigilance"
"clinicaltrials-database"
"biomedical-search"
"tooluniverse-drug-drug-interaction"
)
for skill in "${SKILLS[@]}"; do
cp -r OpenClaw-Medical-Skills/skills/$skill ~/.openclaw/skills/
done
For NanoClaw Users
NanoClaw loads skills into agent containers at startup from container/skills/.
# Clone and copy into NanoClaw container skills directory
git clone https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills.git
cp -r OpenClaw-Medical-Skills/skills/* /path/to/nanoclaw/container/skills/
# Rebuild the container to apply
cd /path/to/nanoclaw
./container/build.sh
Verification
After installation, ask your agent:
What medical and clinical skills do you have available?
Your agent should list the installed skills with their capabilities.
Skills Overview
| Category | Count | Highlights |
|---|---|---|
| General & Core | 10 | Browser/search, document tools, and developer workflow utilities |
| Medical & Clinical | 119 | Clinical reports, CDS, oncology, imaging, and healthcare AI |
| Scientific Databases | 43 | Genomics/protein/drug databases and biomedical knowledge retrieval |
| Bioinformatics (gptomics) | 239 | Variant analysis, sequencing QC, DE, pathways, single-cell, and epigenomics |
| Omics & Computational Biology | 59 | Single-cell/spatial, proteomics, cheminformatics, and protein design tools |
| ClawBio Pipelines | 21 | Orchestration pipelines for scRNA, GWAS, ancestry, and structural workflows |
| BioOS Extended Suite | 285 | Extended agent suite for oncology, immunology, clinical AI, and infrastructure |
| Data Science & Tools | 93 | Statistics, visualization, automation, simulation, and scientific tooling |
| Total | 869 |
General & Core
Medical & Clinical
- Medical Tools
- Drug Safety & Chemical Biology
- Medical Imaging & Pathology
- Healthcare ML & Clinical AI
- Mental Health & Crisis Intervention
- Health & Wellness Analytics
- Medical Device & Regulatory
- Medical Device Software (meddev-agent-skills)
Scientific Databases
- Scientific Databases (Genomics & Variants)
- Scientific Databases (Proteins, Pathways & Drugs)
- Cancer Genomics Databases
- Genomic & Molecular Databases
- Structural Biology & Drug Discovery
Bioinformatics (gptomics bio-* suite)
- Bioinformatics Tools & Pipelines
- Bioinformatics β Clinical Databases & Variant Analysis
- Bioinformatics β Sequencing & Read QC
- Bioinformatics β Differential Expression & Transcriptomics
- Bioinformatics β Pathway & Network Analysis
- Bioinformatics β Single-Cell & Spatial Omics
- Bioinformatics β Epigenomics & Chromatin
- Bioinformatics β Metagenomics & Microbiome
- Bioinformatics β Immunoinformatics & Flow Cytometry
- Bioinformatics β Multi-Omics Integration
- Bioinformatics β Proteomics & Metabolomics
- Bioinformatics β Structural Biology & Cheminformatics
- Bioinformatics β Epidemiological & Causal Genomics
Omics & Computational Biology
- Single-Cell & Spatial Omics
- Single-Cell & Trajectory Analysis
- Proteomics & Mass Spectrometry
- Cheminformatics & Drug Discovery
- Protein Structure & Design
- Phylogenetics & Network Analysis
ClawBio Pipelines
- Bioinformatics Orchestration & Pipelines (ClawBio)
- Genomics, Ancestry & Pharmacogenomics (ClawBio)
- Structural Biology & Literature (ClawBio)
BioOS Extended Suite
- BioOS Extended Bioinformatics Suite
- Oncology & Precision Medicine Agents (BioOS)
- Hematology & Blood Disorders (BioOS)
- Immunology & Cell Therapy (BioOS)
- Single-Cell & Spatial Agents (BioOS)
- Drug Discovery & Design (BioOS)
- Clinical AI & Healthcare (BioOS)
- Research Infrastructure & Agents (BioOS)
Data Science & Tools
- Statistics & Data Analysis
- Data Processing & Scientific Computing
- Scientific Visualization & Communication
- Public Health & Time Series
- Computational Simulation & Ontology
- Analyst Personas
- Lab Automation & Integration
- Scientific Research & Writing
- Scientific Literature & Reference Management
- Additional Scientific Tools
- Developer Workflow Skills
Skills List
π§° General & Core
Expand/Collapse this category
General Tools
Click to expand skill list
| Skill | Description |
|---|---|
| agent-browser | Browse the web for any task β research topics, read articles, interact with web apps, fill forms, take screenshots, extract data, and test web pages. Use whenever a browser would be useful. |
| find-skills | Helps users discover and install agent skills when they ask questions like "how do I do X", "find a skill for X", "is there a skill that can...", or express interest in extending capabilities. |
| multi-search-engine | Multi search engine integration with 17 engines (8 CN + 9 Global). Supports Baidu, Bing, 360, Sogou, WeChat, Google, DuckDuckGo, WolframAlpha and more. Supports advanced operators, time filters, site search. No API keys required. |
| wikipedia-search | Search and fetch structured content from Wikipedia using the MediaWiki API for reliable, encyclopedic information. Supports multi-language queries. |
| deep-research | Execute autonomous multi-step deep research on any topic. Searches multiple sources, reads full content, synthesizes findings, and produces a structured report. Use for comprehensive research, literature reviews, competitive analysis, or topic deep-dives. |
| Comprehensive PDF toolkit β extract text and tables, create new PDFs, merge/split documents, handle forms, OCR scanned PDFs. Use when working with any .pdf file. | |
| docx | Create, edit, and analyze Word documents (.docx). Supports tracked changes, comments, formatting preservation, and text extraction. Use for drafting, redlining, or extracting content from Word files. |
| xlsx | Spreadsheet creation, editing, and analysis. Supports formulas, formatting, data analysis, and visualization. Use for any .xlsx, .xlsm, .csv, or .tsv task. |
| pptx | Presentation creation, editing, and analysis. Supports layouts, speaker notes, templates, and design. Use for any .pptx file. |
| doc-coauthoring | Guide users through a structured workflow for co-authoring documentation. Use when writing documentation, proposals, technical specs, decision docs, or similar structured content. |
π₯ Medical & Clinical
Expand/Collapse this category
Medical Tools
Click to expand skill list
| Skill | Description |
|---|---|
| pubmed-search | Search PubMed for scientific literature. Use when the user asks to find papers, search literature, look up research, find publications, or asks about recent studies. |
| medical-research-toolkit | Query 14+ biomedical databases for drug repurposing, target discovery, clinical trials, and literature research. Access ChEMBL, PubMed, ClinicalTrials.gov, OpenTargets, OpenFDA, OMIM, Reactome, KEGG, UniProt, and more through a unified MCP endpoint. |
| medical-specialty-briefs | Generate daily or on-demand medical research briefs for any medical specialty. Searches latest research from top-tier journals (NEJM, Lancet, JAMA, BMJ, Nature Medicine), delivers concise summaries with 1-sentence takeaways and direct links. Use when user asks for medical news, research updates, or specialty-specific updates (endocrinology, cardiology, oncology, neurology, etc.). |
| usmle | Prepare for US medical licensing exams with progress tracking, weak area analysis, question bank management, and residency match planning. Covers Step 1/2 CK/Step 3, IMG-specific guidance, score prediction, and wellbeing support. |
| medical-entity-extractor | Extract medical entities (symptoms, medications, lab values, diagnoses) from patient messages. |
| patiently-ai | Simplifies medical documents for patients. Takes doctor's letters, test results, prescriptions, discharge summaries, and clinical notes and explains them in clear, personalised language. |
| biomedical-search | Complete biomedical information search combining PubMed, preprints, clinical trials, and FDA drug labels. Powered by Valyu semantic search. |
| medical-imaging-review | Write comprehensive literature reviews for medical imaging AI research. Use when writing survey papers, systematic reviews, or literature analyses on imaging topics. |
| fhir-developer-skill | FHIR API development guide for building healthcare endpoints (Patient, Observation, Encounter, Condition, MedicationRequest). Use when developing or integrating FHIR REST APIs. |
| clinical-trial-protocol-skill | Generate clinical trial protocols for medical devices or drugs. Use when designing clinical studies, creating FDA submission documentation, or developing protocols for investigational products. |
| prior-auth-review-skill | Automate payer review of prior authorization (PA) requests. Assesses medical necessity, validates against coverage policies, and generates PA decisions. |
| clinical-reports | Write comprehensive clinical reports β case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, CSR), and patient documentation (SOAP, H&P, discharge summaries). HIPAA/FDA/ICH-GCP compliant. |
| clinicaltrials-database | Query ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data for clinical research and patient matching. |
| clinical-decision-support | Generate clinical decision support (CDS) documents for pharmaceutical and clinical research β patient cohort analyses, treatment recommendation reports with GRADE evidence grading, biomarker integration, and statistical outputs (hazard ratios, survival curves). |
| tooluniverse-clinical-trial-design | Strategic clinical trial design feasibility assessment. Evaluates patient population sizing, biomarker prevalence, endpoint selection, comparator analysis, safety monitoring, and regulatory pathways. Use when planning Phase 1/2 trials or assessing trial feasibility. |
| tooluniverse-disease-research | Generate comprehensive disease research reports covering epidemiology, mechanisms, diagnostics, treatments, and ongoing trials. Use when asking about diseases, syndromes, or needing systematic disease analysis. |
| tooluniverse-literature-deep-research | Deep literature research with target disambiguation, evidence grading, and structured theme extraction. Resolves gene/protein IDs, identifies synonyms, synthesizes biological models, and generates testable hypotheses. Use for thorough literature reviews or target profiles. |
| tooluniverse-clinical-guidelines | Search and retrieve clinical practice guidelines from 12+ sources (NICE, WHO, ADA, AHA/ACC, NCCN, SIGN, CPIC, etc.). Covers cardiology, oncology, diabetes, pharmacogenomics, and more. Use when asking about treatment recommendations or standard of care. |
| tooluniverse-drug-research | Comprehensive drug research reports covering identity, pharmacology, targets, clinical trials, safety, pharmacogenomics, and ADMET. Use for drug profiling, safety assessment, or clinical development research. |
| tooluniverse-drug-repurposing | Identify drug repurposing candidates using target-based, compound-based, and disease-driven strategies. Finds new indications for approved drugs by analyzing targets, bioactivity, and safety profiles. |
| tooluniverse-drug-drug-interaction | Drug-drug interaction prediction and risk assessment. Analyzes CYP450/transporter mechanisms, severity classification, and provides management strategies. Supports polypharmacy analysis (3+ drugs) and alternative drug recommendations. |
| tooluniverse-rare-disease-diagnosis | Differential diagnosis for rare diseases based on phenotype and genetic data. Matches symptoms to HPO terms, identifies candidate diseases from Orphanet/OMIM, and interprets variants of uncertain significance. |
| tooluniverse-pharmacovigilance | Analyze drug safety signals from FDA adverse event reports, label warnings, and pharmacogenomic data. Calculates PRR/ROR, identifies serious adverse events, and assesses pharmacogenomic risk. |
| tooluniverse-clinical-trial-matching | Patient-to-trial matching for precision medicine and oncology. Ranks trials from ClinicalTrials.gov by molecular eligibility, clinical criteria, biomarker alignment, and geographic feasibility with a quantitative Trial Match Score (0-100). |
| literature-review | Systematic literature reviews across multiple databases (PubMed, arXiv, bioRxiv, Semantic Scholar). Produces professionally formatted reports with verified citations in APA, Nature, Vancouver styles. |
| tooluniverse-precision-oncology | Actionable treatment recommendations for cancer patients based on molecular profile. Interprets tumor mutations, identifies FDA-approved therapies, clinical trials, and resistance mechanisms. |
| tooluniverse-cancer-variant-interpretation | Clinical interpretation of somatic mutations in cancer. Given gene+variant (e.g., EGFR L858R, BRAF V600E), assesses oncogenicity, therapeutic implications, and trial eligibility. |
| tooluniverse-variant-analysis | Production-ready VCF processing, variant annotation, and mutation analysis. Parses VCF files, annotates with ClinVar/gnomAD/COSMIC, and interprets clinical significance. |
| tooluniverse-variant-interpretation | Systematic clinical variant interpretation from raw calls to ACMG-classified recommendations. Aggregates evidence from ClinVar, gnomAD, literature, and population databases. |
| tooluniverse-structural-variant-analysis | Comprehensive structural variant (SV/CNV) analysis for clinical genomics. Classifies SVs, assesses pathogenicity, and interprets copy number alterations. |
| tooluniverse-polygenic-risk-score | Build and interpret polygenic risk scores (PRS) for complex diseases using GWAS summary statistics. Calculates genetic risk profiles and interprets PRS percentiles. |
| tooluniverse-precision-medicine-stratification | Patient stratification for precision medicine by integrating genomic, clinical, and therapeutic data. Identifies treatment-relevant subgroups and biomarker-driven therapy options. |
| tooluniverse-gwas-trait-to-gene | Discover genes associated with diseases and traits using GWAS Catalog (500k+ associations) and Open Targets Genetics locus-to-gene predictions. |
| tooluniverse-gwas-drug-discovery | Transform GWAS signals into drug targets and repurposing opportunities. Performs locus-to-gene mapping, druggability assessment, and existing drug identification. |
| tooluniverse-gwas-study-explorer | Compare GWAS studies and assess replication across cohorts. Integrates NHGRI-EBI GWAS Catalog and Open Targets Genetics for cross-study meta-analysis. |
| tooluniverse-gwas-finemapping | Identify and prioritize causal variants at GWAS loci using statistical fine-mapping. Computes posterior probabilities and credible sets for causal variant identification. |
| tooluniverse-gwas-snp-interpretation | Interpret SNPs from GWAS studies by aggregating evidence from GWAS Catalog, Open Targets Genetics, and ClinVar. Retrieves variant-trait associations and functional annotations. |
| tooluniverse-phylogenetics | Phylogenetics and sequence analysis β alignment processing, evolutionary tree construction, and evolutionary metrics for pathogens or species. |
| tooluniverse-epigenomics | Epigenomics data processing β methylation array analysis (CpG filtering, differential methylation), chromatin accessibility, and histone modification analysis. |
| tooluniverse-rnaseq-deseq2 | RNA-seq differential expression analysis using PyDESeq2. Performs normalization, dispersion estimation, Wald testing, LFC shrinkage, and pathway enrichment. |
| tooluniverse-single-cell | Single-cell RNA-seq analysis using scanpy. Performs QC, normalization, PCA, UMAP, Leiden clustering, trajectory analysis, and cell type annotation. |
| tooluniverse-spatial-transcriptomics | Spatial transcriptomics data analysis β maps gene expression in tissue architecture. Supports 10x Visium, MERFISH, seqFISH, and Slide-seq platforms. |
| tooluniverse-spatial-omics-analysis | Computational analysis for spatial multi-omics data integration β spatially variable genes, domain annotation, and tissue-resolved omics. |
| tooluniverse-proteomics-analysis | Mass spectrometry proteomics analysis β protein quantification, differential expression, PTMs, and protein-protein interaction network construction. |
| tooluniverse-metabolomics | Metabolomics research β identifies metabolites and searches databases (HMDB 220k+ metabolites, MetaboLights, Metabolomics Workbench). |
| tooluniverse-metabolomics-analysis | Metabolomics data analysis β metabolite identification, quantification, pathway analysis, and metabolic flux from LC-MS, GC-MS, or NMR data. |
| tooluniverse-multi-omics-integration | Integrate transcriptomics, proteomics, epigenomics, genomics, and metabolomics for systems biology and precision medicine. |
| tooluniverse-multiomic-disease-characterization | Systems-level disease characterization integrating genomics, transcriptomics, proteomics, pathway, and therapeutic layers. |
| tooluniverse-expression-data-retrieval | Retrieve gene expression and omics datasets from ArrayExpress and BioStudies with quality assessment and structured reports. |
| tooluniverse-gene-enrichment | Gene enrichment and pathway analysis using gseapy, PANTHER, STRING, Reactome. Supports GO enrichment, KEGG pathways, and 40+ ToolUniverse tools. |
| tooluniverse-systems-biology | Systems biology and pathway analysis using Reactome, KEGG, WikiPathways, Pathway Commons, and BioModels. Network modeling and pathway simulation. |
| tooluniverse-protein-interactions | Protein-protein interaction network analysis using STRING, BioGRID, and SASBDB. Maps interaction networks with confidence scores and functional modules. |
| tooluniverse-protein-structure-retrieval | Retrieve protein structure data from RCSB PDB, PDBe, and AlphaFold with quality assessment and comprehensive structural profiles. |
| tooluniverse-protein-therapeutic-design | Design novel protein therapeutics (binders, enzymes, scaffolds) using AI-guided de novo design β RFdiffusion, ProteinMPNN, and ESM. |
| tooluniverse-antibody-engineering | Antibody engineering and optimization for therapeutics β humanization, affinity maturation, developability assessment, and immunogenicity prediction. |
| tooluniverse-immune-repertoire-analysis | TCR/BCR repertoire analysis from sequencing data β clonality, diversity, V(D)J gene usage, clonal expansion, and antigen specificity prediction. |
| tooluniverse-immunotherapy-response-prediction | Predict patient response to immune checkpoint inhibitors using multi-biomarker integration β TMB, MSI, PD-L1, TIL signatures, and HLA typing. |
| tooluniverse-infectious-disease | Pathogen characterization and drug repurposing for infectious disease outbreaks. Identifies taxonomy, essential proteins, structural targets, and treatment options. |
| tooluniverse-crispr-screen-analysis | CRISPR screen analysis for functional genomics β pooled or arrayed screens (knockout/activation/interference) to identify essential genes and hits. |
| tooluniverse-target-research | Comprehensive biological target intelligence β protein info, structure, interactions, pathways, expression, variant landscape, and drug pipeline. |
| tooluniverse-network-pharmacology | Compound-target-disease network analysis for drug repurposing, polypharmacology discovery, and systems pharmacology. |
| tooluniverse-statistical-modeling | Statistical modeling on biomedical datasets β linear/logistic regression, mixed-effects models, survival analysis, and Bayesian methods. |
| tooluniverse-image-analysis | Biomedical microscopy image analysis β colony morphometry, cell counting, fluorescence quantification, and statistical comparison of imaging data. |
| literature-search | Comprehensive scientific literature search across PubMed, arXiv, bioRxiv, medRxiv using natural language queries powered by Valyu semantic search. |
| medrxiv-search | Search medRxiv medical preprints with natural language queries powered by Valyu semantic search. |
| clinical-trials-search | Search ClinicalTrials.gov with natural language queries β find trials by condition, enrollment status, and outcomes via Valyu. |
| drug-discovery-search | End-to-end drug discovery platform combining ChEMBL, DrugBank, targets, and FDA labels via natural language Valyu search. |
| drug-labels-search | Search FDA drug labels with natural language queries β indications, dosing, and safety data via Valyu. |
| chembl-search | Search ChEMBL bioactive molecules database β compounds, assay data, and bioactivity via Valyu semantic search. |
| open-targets-search | Search Open Targets drug-disease associations and target validation via Valyu semantic search. |
| patents-search | Search global patents with natural language queries β prior art, patent landscapes, and innovation tracking via Valyu. |
| drugbank-search | Search DrugBank comprehensive drug database β mechanisms, interactions, and safety data via Valyu semantic search. |
| arxiv-search | Search arXiv preprints (biology, medicine, AI) using natural language queries powered by Valyu semantic search. |
| gwas-database | Query NHGRI-EBI GWAS Catalog for SNP-trait associations by rs ID, disease/trait, or gene. Retrieve p-values and summary statistics for genetic epidemiology. |
| scikit-survival | Survival analysis and time-to-event modeling in Python β Kaplan-Meier, Cox regression, log-rank tests, and censored data handling using scikit-survival. |
Drug Safety & Chemical Biology
Click to expand skill list
| Skill | Description |
|---|---|
| tooluniverse-adverse-event-detection | Detect and analyze adverse drug event signals using FDA FAERS data, drug labels, disproportionality analysis (PRR, ROR, IC), and biomedical evidence. Generates quantitative safety signal scores (0-100). |
| tooluniverse-binder-discovery | Discover novel small molecule binders for protein targets using structure-based and ligand-based approaches. Creates actionable reports with candidate compounds, ADMET profiles, and synthesis feasibility. |
| tooluniverse-chemical-compound-retrieval | Retrieves chemical compound information from PubChem and ChEMBL with disambiguation, cross-referencing, and quality assessment. Comprehensive compound profiles with identifiers, properties, bioactivity. |
| tooluniverse-chemical-safety | Comprehensive chemical safety and toxicology assessment integrating ADMET-AI predictions, CTD toxicogenomics, FDA label safety data, DrugBank safety profiles, and STITCH chemical-protein interactions. |
| tooluniverse-drug-target-validation | Computational validation of drug targets across 10 dimensions: disambiguation, disease association, druggability, chemical matter, clinical precedent, safety, and expression evidence. |
| tooluniverse-sequence-retrieval | Retrieve biological sequences (DNA, RNA, protein) from NCBI and ENA with gene disambiguation, accession type handling, and comprehensive sequence profiles. |
Medical Imaging & Pathology
Click to expand skill list
| Skill | Description |
|---|---|
| pydicom | Python library for working with DICOM medical imaging files. Reading, writing, modifying DICOM data, extracting pixel data, handling metadata and multi-frame files. |
| histolab | Digital pathology image processing toolkit for whole slide images (WSI). Process H&E or IHC stained tissue images, extract tiles from gigapixel slides. |
| pathml | Computational pathology toolkit for analyzing WSI and multiparametric imaging data. H&E stained images, multiplex immunofluorescence, spatial omics integration. |
| omero-integration | Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, for high-content screening workflows. |
| neurokit2 | Comprehensive biosignal processing: ECG, EEG, EDA, RSP, PPG, EMG, EOG signals. Cardiovascular signal analysis, neurophysiology, and physiological data processing. |
| neuropixels-analysis | Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, for neuroscience research. |
Healthcare ML & Clinical AI
Click to expand skill list
| Skill | Description |
|---|---|
| pyhealth | Comprehensive healthcare AI toolkit for developing ML models with clinical data (EHR, claims). Task definition API, model training, evaluation for clinical NLP and prediction. |
| scikit-learn | Machine learning in Python: supervised learning (classification, regression), unsupervised learning (clustering, dimensionality reduction), model evaluation, hyperparameter tuning. |
| transformers | Pre-trained transformer models for NLP, computer vision, audio, and multimodal tasks. Text generation, classification, question answering, and biomedical NLP (BioBERT, ClinicalBERT). |
| shap | Model interpretability using SHAP (SHapley Additive exPlanations). Explain ML model predictions, compute feature importance, generate SHAP plots for biomedical models. |
| umap-learn | UMAP dimensionality reduction. Fast nonlinear manifold learning for 2D/3D visualization, clustering preprocessing (HDBSCAN), for high-dimensional omics data. |
Health & Wellness Analytics
Click to expand skill list
| Skill | Description |
|---|---|
| nutrition-analyzer | Comprehensive nutrition analysis: macro/micronutrient tracking, dietary assessment, meal planning, food data lookup, and nutritional recommendations. |
| mental-health-analyzer | Mental health data analysis: mood tracking, symptom patterns, PHQ/GAD scoring, behavioral insights, and wellness recommendations. |
| sleep-analyzer | Sleep quality analysis: sleep stages, duration, efficiency metrics, circadian rhythm assessment, and sleep hygiene recommendations. |
| rehabilitation-analyzer | Rehabilitation progress tracking: functional assessments, exercise programs, recovery milestones, and outcome measurement for physical/occupational therapy. |
| fitness-analyzer | Fitness performance analysis: exercise tracking, strength/cardio metrics, training load, VO2max estimation, and periodization planning. |
| health-trend-analyzer | Longitudinal health trend analysis: vital sign tracking, biomarker trends, risk factor monitoring, and predictive health insights. |
| weightloss-analyzer | Weight management analytics: caloric balance, body composition tracking, progress monitoring, and evidence-based weight loss strategies. |
| goal-analyzer | Health goal tracking and analysis: SMART goal setting, progress metrics, habit formation, and motivational insights for wellness objectives. |
| occupational-health-analyzer | Occupational health assessment: workplace ergonomics, exposure risk, work-related illness surveillance, and return-to-work planning. |
| travel-health-analyzer | Travel medicine: destination health risks, vaccination requirements, malaria prophylaxis, altitude sickness, and traveler health preparation. |
| family-health-analyzer | Family health management: pediatric milestones, family medical history, preventive screening schedules, and multigenerational health tracking. |
| tcm-constitution-analyzer | Traditional Chinese Medicine constitution analysis: TCM body type assessment, pattern differentiation, herbal recommendations, and lifestyle guidance. |
| emergency-card | Generate emergency medical information cards with critical health data, medications, allergies, and emergency contacts for patient safety. |
| ai-analyzer | AI-powered comprehensive health data interpretation combining multiple biomarkers and health metrics for holistic wellness assessment. |
| wellally-tech | Technical framework for WellAlly health analytics platform: integration patterns, data pipelines, and health AI infrastructure. |
Mental Health & Crisis Intervention
Click to expand skill list
| Skill | Description |
|---|---|
| crisis-detection-intervention-ai | Detect crisis signals using NLP and mental health sentiment analysis. Implements suicide ideation detection, automated escalation, and crisis resource integration for mental health apps and recovery platforms. |
| crisis-response-protocol | Handle mental health crisis situations safely: crisis detection, safety protocols, emergency escalation, suicide prevention, and hotline integration for AI coaching applications. |
| hipaa-compliance | Ensure HIPAA compliance when handling PHI. Audit logging, data access controls, security event tracking, and compliance verification for health data applications. |
| clinical-diagnostic-reasoning | Identify and counteract cognitive biases in medical decision-making through systematic error analysis, differential diagnosis frameworks, and clinical judgment improvement. |
| speech-pathology-ai | AI-powered speech-language pathology: phoneme analysis, articulation visualization, voice disorder assessment, fluency intervention, AAC, and stuttering treatment support. |
| hrv-alexithymia-expert | Heart rate variability biometrics and emotional awareness training. HRV analysis, interoception training, biofeedback, vagal tone assessment, and autonomic nervous system evaluation. |
| adhd-daily-planner | ADHD-optimized daily planning: time-blind friendly scheduling, executive function support, dopamine-aware task design, and neurodivergent-friendly productivity systems. |
// compatibility
| Platforms | cli, api, desktop, web, mobile |
|---|---|
| Operating systems | β |
| AI compatibility | claude |
| License | β |
| Pricing | open-source |
| Language | Python |
// faq
What is OpenClaw-Medical-Skills?
The largest open-source medical AI skills library for OpenClawπ¦.. It is open-source on GitHub.
Is OpenClaw-Medical-Skills free to use?
OpenClaw-Medical-Skills is open-source, so it is free to use.
What category does OpenClaw-Medical-Skills belong to?
OpenClaw-Medical-Skills is listed under skills in the Claudeers registry of Claude-compatible tools.
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A collection of notebooks/recipes showcasing some fun and effective ways of using Claude.
β¨ Light and Fast AI Assistant. Support: Web | iOS | MacOS | Android | Linux | Windows
Persistent Context Across Sessions for Every Agent β Captures everything your agent does during sessions, compresses it with AI, and injects relevant contexβ¦